IMMAN is a free and platform free software for reconstructing Interlog Protein Network (IPN) integrated from several Protein-protein Interaction Networks (PPIN). In order to mine the conserved common network between diverse species, users can overlay the different PPINs for each species. IMMAN helps to retrieve IPN with different degrees of conservation to employ for better protein function prediction and PPIN analysis.
IMMAN is available both in Java and R. Each version has its own help and quite straightforward to work with.
You can download the R version from GitHub and the Java version from here.
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